Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq39426 91.5 4e-14 >seq39426 Length=18799 Score = 91.5 bits (100), Expect = 4e-14 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 8869 AAACAAATTGCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGG 8928 |||| || || | |||||| | ||||| | || | ||| || ||||||||||| ||| Sbjct 2720 AAACTTATGGCAAGGGAACTTAATGTTCCTGTTATTGTGCTTTCACAGCTTAATCGTGGG 2779 Query 8929 CTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATC 8988 || ||| | | || || || | || |||||| ||||| || || || || || ||| Sbjct 2780 CTTGAGCAAAGACCTAATAAAAGACCTGTCATGAGTGATCTTCGTGAATCTGGAGCAATC 2839 Query 8989 GAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAA 9038 ||||| ||||| ||| | ||| |||||| || || ||||| || || || Sbjct 2840 GAGCAAGATGCTGACTTAATCTGCTTTATTTATCGAGATGAAGTTTACAA 2889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127284480755796