Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq154449 192 2e-44 >seq154449 Length=1485 Score = 192 bits (212), Expect = 2e-44 Identities = 247/341 (72%), Gaps = 0/341 (0%) Strand=Plus/Minus Query 22112 CGACGACTACGTTTTCAACCTCGACCCGATCCGGGTGCCATCGAAATACCCCGGAAAGAA 22171 ||| |||||| |||| | || || |||||||| || || || || || || ||| || Sbjct 899 CGATGACTACACTTTCCATCTGGATCCGATCCGCGTCCCGTCTAAGTATCCTCAAAAAAA 840 Query 22172 ATACTTCAAAGGGCCGAAGGCTGGTCAGCTCTCCTGCAATCCGCTGGGAAAAAACCCAGG 22231 || | |||||| || || || || ||||| || | ||||| || || ||||| || | Sbjct 839 GTATTACAAAGGCCCAAAAGCAGGACAGCTTTCGGGTAATCCACTTGGCAAAAATCCCAG 780 Query 22232 CGACGTGTGGATTTTCCCCAACGTCAAGAACAACCACGTCGAAAAGACCGACCATCCATG 22291 ||| || ||| |||| |||||||| ||||||||||| || || || ||| ||||| || Sbjct 779 CGATGTTTGGGTTTTTCCCAACGTGAAGAACAACCATGTTGAGAAAACCATTCATCCCTG 720 Query 22292 CCAGTTCCCGGTCGAGCTGGTCGAGCGGTTGGTGCTGTCGCTGACCGAGCCCGGTGACGC 22351 |||||| || | ||| |||||||||| | || ||||| ||||||| || ||| Sbjct 719 CCAGTTTCCTATTGAGTTGGTCGAGCGTCTTGTTTTGTCGATGACCGATGAAGGGGACAG 660 Query 22352 GGTGCTCGACCCGTACATGGGCGTGGGCTCGTCGGTCGTCGCTGCCCTCAAGCACGACCG 22411 || | || || |||||||| || || |||||||| || | || || ||||| | || Sbjct 659 TGTTTTTGATCCTTACATGGGGGTCGGATCGTCGGTTGTTGGAGCGCTAAAGCATGGTCG 600 Query 22412 CCTCGGGTACGGCTGCGACGTCGTGAAGGAGTACGTCGATG 22452 || ||||| || ||||| ||||| ||||| ||||||| Sbjct 599 TAAAGGTTACGGTTGTGACGTGGTGAAAGAGTATGTCGATG 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197383874530458