Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq162256 93.3 6e-14 >seq162256 Length=2892 Score = 93.3 bits (102), Expect = 6e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 ||||| || || | |||| | || || || || |||| |||||| || || |||| Sbjct 2113 TAACAAGCCAGCAGGAAACCTCCATATGTGCCTGTTCGCTTTCCTTTTCCTTTATAGCCA 2054 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCC-ATGTAATCTTTCTTCAGTTT 197207 ||||| || |||| || | | |||| ||| ||| |||||||| || |||||||| Sbjct 2053 CCGATTACTACCAAGTCTAATGAATCGC-CACAACTTTGTATGTAATCCTTTTTCAGTTT 1995 Query 197208 GAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGAT 197267 |||||| | | || | ||| || || || || ||||||| | ||||||||||| | Sbjct 1994 AAGCCAGTTCCGTGAACGCTTTGCGATTTCATATGTTGCGTCTTTCTCCAGGGTCTTCAC 1935 Query 197268 CATCAATCCCTCGCA 197282 ||| || |||||||| Sbjct 1934 CATTAAACCCTCGCA 1920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 675271239252880