Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq24727 129 2e-25 >seq24727 Length=7596 Score = 129 bits (142), Expect = 2e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547 ||||| ||| | || ||||| || || | ||||| ||||| | |||| |||| ||||| Sbjct 5303 AAAGATGATAGAACTGGAACTGGGACTTACTCGGTTTTCGGGCATCAGATGCGTTTTAAT 5244 Query 45548 TTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTAT 45607 || || || || || || || ||||| ||||| || ||| | ||||| |||||| Sbjct 5243 TTAGCCGAAGGTTTTCCTCTTGTAACGACTAAAAAATTACATCTTAAATCGATTATTTAT 5184 Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667 ||||| | ||||||||||| |||||||| ||| | ||||| || ||||||||| Sbjct 5183 GAACTTTTATGGTTTTTAAATGGCGATACAAATATCAAATATTTAACCGATAATGGTGTG 5124 Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCC 45711 | |||||| |||| ||||| ||| || |||||| | || || Sbjct 5123 AGAATTTGGAACGAATGGGCAGATAGTAATGGCGATTTAGGACC 5080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157427443620314