Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021067.1 Length=135982 Score E Sequences producing significant alignments: (Bits) Value seq18428 98.7 9e-16 >seq18428 Length=2515 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 10943 TTCGCAATCTCAAAGTATTGGTCGTCTAGCTCAATACCGATAAAGCCACGGTTTAAGTTT 11002 || || || | |||||| | || |||| ||| ||||| ||||| | | ||| ||| | Sbjct 2290 TTTGCGATATTAAAGTAATTATCATCTAACTCTATACCTATAAATCGCCTGTT--AGTAT 2233 Query 11003 TTGGCC--GCTACGCCCGTAGTGCCGGAACCCATAGTGAAGTCTAAAACCGTTTCGCCTT 11060 || | || || || || | ||| |||||| || || || | || |||||| || Sbjct 2232 TTACACAAGCAACCCCAGTTGAACCGCTACCCATTGTAAAATCAAGCACAGTTTCGTTTT 2173 Query 11061 CGTTGGTGTAGGTCTTTATTAGGTACTCCATTAGAGCGACTGGTTTTTGGGTTGGGTGCA 11120 |||| ||||| || || |||| ||||||||| || | |||||||||||||||||||||| Sbjct 2172 CGTTTGTGTATGTTTTGATTAAGTACTCCATAAGTGGAACTGGTTTTTGGGTTGGGTGCA 2113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434076938530320