Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq153791 104 4e-17 seq76123 104 4e-17 >seq153791 Length=3075 Score = 104 bits (114), Expect = 4e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| |||||| |||| ||||| |||||||||||||| || || | | ||| || Sbjct 2623 ACCAAATGCAAAGTAGATTCTTTTTGGATATTATAGTCGGAGAATGTGCGACCATCTTCC 2682 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 |||||||| || ||||| | || | ||||||||| ||||| ||| | ||||| | || Sbjct 2683 AATTGTTTGCCAGCAAATACCAAACGCTGTTGATCTGGAGGAATTTCCTCTTTTTGCTGA 2742 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGT 193321 || | || ||||| |||| ||| |||| || | |||||| | ||||| Sbjct 2743 ATCTAGGCTTTTACATTTTCGATACTATCAGAGGGCTCAACCGCAAGAGT 2792 >seq76123 Length=2128 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | ||| || || |||||||| | ||| | |||||| || ||||||||| Sbjct 985 ATACCACCACGCAAGCGGAGCACCAGATGAAGTGTCGACTCTTTTTGGATGTTATAGTCG 1044 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || ||||| || || ||||||||||| | || ||||| || Sbjct 1045 GATAATGTGCGTCCATCTTCCAATTGCTTACCAGCAAAAATTAAACGTTGCTGATCTGGT 1104 Query 193251 GGTATTCCTTCTTTATCTTG 193270 || || |||||||||||||| Sbjct 1105 GGAATACCTTCTTTATCTTG 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897715633522320