Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq24727 104 3e-17 >seq24727 Length=7596 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 98982 TTCGGCCACCAGATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGT 99041 ||||| || ||||||||||| || || |||||||| || || |||||||| || Sbjct 5267 TTCGGGCATCAGATGCGTTTTAATTTAGCCGAAGGTTTTCCTCTTGTAACGACTAAAAAA 5208 Query 99042 TGCCACCTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATC 99101 | || || || ||||| ||||||| | ||||| | || ||||| || |||||| Sbjct 5207 TTACATCTTAAATCGATTATTTATGAACTTTTATGGTTTTTAAATGGCGATACAAATATC 5148 Query 99102 CAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGAC 99161 | || | | ||||||||||| | |||||| |||||||||| || | |||||||| Sbjct 5147 AAATATTTAACCGATAATGGTGTGAGAATTTGGAACGAATGGGCAGATAGTAATGGCGAT 5088 Query 99162 CTCGGTCCGGTATACGGTAA 99181 | || || || || ||||| Sbjct 5087 TTAGGACCTGTTTATGGTAA 5068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715092438738040