Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq146045 96.9 2e-15 >seq146045 Length=14020 Score = 96.9 bits (106), Expect = 2e-15 Identities = 204/302 (68%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 12409 TGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAGCTGC 12468 |||||| | ||||| |||| ||| ||||| || |||| | ||| || | || || Sbjct 10927 TGAAACAATATTAATCAAAACAGGTATGGCTGTTTATCTTAAAGATCCGAATTTTGCAGC 10868 Query 12469 AATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACCTTAC 12528 |||||| | |||||||||||||| ||| || ||||| | |||||||| || | Sbjct 10867 GATGATTTTGCCTCGTTCAGGTCTTGGCGTAAAGCATGGGATTGTGCTTGGTAATTTAGT 10808 Query 12529 TGGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCTCTAC 12588 ||| | |||||| | |||||||| ||||| | ||||| | |||||| | Sbjct 10807 TGGATTAATTGATGCGGATTATCAAGGTGAGTTGATGGTTTCTGTATGGAATAGAAGCCA 10748 Query 12589 AGAGCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCTGTAAT 12648 | |||||||| | | ||||| ||| | || |||||| | ||||| ||||| || Sbjct 10747 AAAGCCTTTTGTAATAGAAATAGGTGAGCGTTTAGCGCAGATGATTATCGTTCCTGTGAT 10688 Query 12649 GCAGCCTGAGTTCGTTGTAGTGGATTCATTTG-AATCTACTGAACGTGGTGCTGGTGGCT 12707 ||| | || || || || || || |||| ||||| |||| | |||| || || | Sbjct 10687 ACAGGCAGAATTTAATGAGGTCGAATCCTTTGAAATCT-CTGAGAGAGGTGAAGGCGGAT 10629 Query 12708 TT 12709 || Sbjct 10628 TT 10627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231049511100155