Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq146045 100 1e-16 >seq146045 Length=14020 Score = 100 bits (110), Expect = 1e-16 Identities = 186/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 7968 TGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGATGTGAAGTATGCAGC 8027 |||||| | ||| | |||| ||| ||||| || |||| | ||| ||| | |||||| Sbjct 10927 TGAAACAATATTAATCAAAACAGGTATGGCTGTTTATCTTAAAGATCCGAATTTTGCAGC 10868 Query 8028 AATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAACCTTAC 8087 |||||| | |||||||||||||| ||| |||||||| | |||||||| || | Sbjct 10867 GATGATTTTGCCTCGTTCAGGTCTTGGCGTAAAGCATGGGATTGTGCTTGGTAATTTAGT 10808 Query 8088 TGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCTCTAC 8147 ||| | |||||| | || ||||| ||||| | ||||| | |||||| | Sbjct 10807 TGGATTAATTGATGCGGATTATCAAGGTGAGTTGATGGTTTCTGTATGGAATAGAAGCCA 10748 Query 8148 AGAGCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCTGTAAT 8207 | |||||||| | | ||||| ||| | || |||||| | ||||| ||||| || Sbjct 10747 AAAGCCTTTTGTAATAGAAATAGGTGAGCGTTTAGCGCAGATGATTATCGTTCCTGTGAT 10688 Query 8208 GCAGCCTGAGTTCGTTGTAGTGGATTCATTTGA 8240 ||| | || || || || || || ||||| Sbjct 10687 ACAGGCAGAATTTAATGAGGTCGAATCCTTTGA 10655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230104301297299