Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq36960 91.5 9e-14 >seq36960 Length=7817 Score = 91.5 bits (100), Expect = 9e-14 Identities = 167/243 (69%), Gaps = 14/243 (6%) Strand=Plus/Minus Query 96157 TGAGCTAATACTGTAGCTGTGGTTGTTCCATCTCCTACTTCTGTATTAGTATTCTCAGCT 96216 || ||||| ||||| ||||| || |||||||| ||| | ||| | | | | || | Sbjct 6290 TGTGCTAAAACTGTCGCTGTTGTCGTTCCATCACCTGCGA---TATCTGCAGTTTTAGAT 6234 Query 96217 ---ACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAATGGATCTTCTAAATGAATTTCT 96273 |||| ||||| |||||| || || | ||||||||| |||||| | | || ||| Sbjct 6233 GAAACTTCTTTAACCATTTGTGCTCCCATGTTTTCAAACTTATCTTCAAGTTCGATCTCT 6174 Query 96274 CTAGCCACACTTACACCATCTTTAGTAATGATTGG----ATTATACTGGTCTAAACCTAG 96329 |||| ||| |||||||||||||||||| |||| | ||| | | ||| Sbjct 6173 TTAGCAACAGATACACCATCTTTAGTAATTGTTGGCGCACCAAAACTTTTTT----CTAA 6118 Query 96330 TATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACTGCATTAGCTAAAGCATCTAC 96389 | ||| || |||| || |||| |||||||||||||||||||| | | || ||| Sbjct 6117 AACAACGTTACGACCTTTAGGACCTAACGTTACTTTAACTGCATTAGCAAGCGTATTTAC 6058 Query 96390 ACC 96392 ||| Sbjct 6057 ACC 6055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320537887840819