Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq132057 91.5 2e-13 seq74067 86.0 7e-12 >seq132057 Length=1668 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 154518 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAGTCCT 154577 ||||||||||| |||||||||||||||||||||||||||| || | ||||||||| |||| Sbjct 277 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 336 Query 154578 GTCTG 154582 | ||| Sbjct 337 GACTG 341 >seq74067 Length=10880 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 19633 TCAAT-CCTCTATAGCTCAGTTGGTAG-AGCAGGTGACTGTTAATCACCCTGTCCCTGGT 19690 ||||| |||| |||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct 9791 TCAATTCCTCGATAGCTCAGTTGGTAGTAGCACTTGACTGTTAATCAAGGGGTCCCTGGT 9850 Query 19691 TCGAGTCCAGGTGGAGGAG 19709 ||||| |||||| |||||| Sbjct 9851 TCGAGCCCAGGTCGAGGAG 9869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544098528576080