Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq141991 132 5e-26 seq125046 111 1e-19 >seq141991 Length=1311 Score = 132 bits (146), Expect = 5e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 25559 TGAGCGAAACCAGGAGGAATCCAAAATTGTGTTTTATTCTTTTCAGATAAGAGAACACCT 25618 ||||| | ||| || ||||||||||||||| ||||||| | |||| ||| | |||||| Sbjct 963 TGAGCAAGACCTGGCGGAATCCAAAATTGTTTTTTATTTTCTTCATTTAAAATAACACCA 904 Query 25619 ACCCATTCTCCAAATGTTGGACTACCAACCCTAATATCTACAGCAACATCATAAACTTCA 25678 |||| | ||| | || || | | |||||| ||||| |||||| |||||||| Sbjct 903 GCCCACTGACCATAAGTCGGCGAGTCTTTACGAATATCAACAGCCACATCAAAAACTTCA 844 Query 25679 CCACGAACACAGCGTACCAACTTCCCTTGTGGGTTTTTCTTTTGAAAATGAAGCCCACGT 25738 ||||||||| ||||| | ||| ||||| | || ||||| ||||||| || | | Sbjct 843 CCACGAACAACTCGTACAAGCTTACCTTGCGCTCGTTGTGTTTGATAATGAAGTCCTCTT 784 Query 25739 AGAACTCCTCGGATAGAACGTGAATGGTTATCTTGGACAAA 25779 | ||||||| |||||| ||||| |||||||| ||||| Sbjct 783 AAAACTCCTTTACGAGAACGAGAATGATTATCTTGTACAAA 743 >seq125046 Length=1529 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27153 ACCATTACCATAAACAGGGATTGGTTTATGCATTAAGATATTTGTTATCGTTTTAGGTAT 27212 |||||| ||||||| ||| | || ||| |||| ||| | ||||| ||| || Sbjct 810 ACCATTGCCATAAATAGGTAAAGGCTTACCTTTTAACGCATTAATAATCGTGACAGGAAT 869 Query 27213 TAGTTTTTCTGGATGATGATATGCTCCAAAATTATTTGAACAATTTGTTATAACTGTCGG 27272 || ||||||||| ||| | | ||| | ||||| |||||||| |||| ||| || Sbjct 870 TAATTTTTCTGGGAAATGGAAAGGACCATAGTTATTCGAACAATTCGTTACAACCACAGG 929 Query 27273 AATACCATAAGTACGATGCCACGCTCTTACCAAATGATCGCTTGCAGCTTTAGATGCAGC 27332 | ||| | ||||||||||| |||| || |||||||| || | ||||||||||| | Sbjct 930 CAATCCAAACGTACGATGCCATGCTCGAACTAAATGATCACTCGAGGCTTTAGATGCGGA 989 Query 27333 ATATGGACTACTTGGTTTATAAGGATTCTGTTCTGTAAA 27371 ||| || ||||||||| ||| | | | ||||||||| Sbjct 990 ATACGGGCTACTTGGTGCATATGAAGTTGTTTCTGTAAA 1028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474405841545120