Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_025422.1 Length=155997 Score E Sequences producing significant alignments: (Bits) Value seq24727 82.4 8e-11 >seq24727 Length=7596 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/187 (70%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 23316 GAACGCTGCAAAAGATGGCAGTTGAGCTTACCTTTAGTCACTCCAAATTGAAATGTCATA 23375 || ||||| |||| || || ||| ||| || | ||| ||| || ||| | | Sbjct 4801 GAGCGCTGATAAAGCTGACAAGAGAGTTTATTATTCGCCACATAAAACTGGAATAATAAA 4860 Query 23376 TGACAAGGAGGTAGCGCCATTTGATCAATTTCACCAGGATTCCAAGCAGTCACAATATGT 23435 |||||||| ||||||||||||| || |||||||||| |||||| |||| ||||| Sbjct 4861 TGACAAGGCGGTAGCGCCATTTCATTAATTTCACCAACATTCCATGCAGAAACAATCAAG 4920 Query 23436 CTACGCGAATATGGATTGGTCTTGATATCTTCAATTA---CTTTCGCGAGTTGATCAATT 23492 | | |||| |||||||| || || | || |||| |||| | |||||||||| Sbjct 4921 CGTCTTGAATTAGGATTGGTTTTAATCGCCTCGATTAACTCTTT---AAATTGATCAATT 4977 Query 23493 GTTTTAT 23499 |||| || Sbjct 4978 GTTTGAT 4984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497986914289720