Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq24727 95.1 1e-14 >seq24727 Length=7596 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| |||||||||||||| ||| | || |||| ||||||||| | | || || || Sbjct 5267 TTCGGGCATCAGATGCGTTTTAATTTAGCCGAAGGTTTTCCTCTTGTAACGACTAAAAAA 5208 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 | ||||| || ||||| || ||||| | ||||| | || |||||||| || ||| Sbjct 5207 TTACATCTTAAATCGATTATTTATGAACTTTTATGGTTTTTAAATGGCGATACAAATATC 5148 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 || ||| | |||| | || | || ||| | |||||||| ||| |||||| | Sbjct 5147 AAATATTTAACCGATAATGGTGTGAGAATTTGGAACGAATGGGCAGATAGTAATGGCGAT 5088 Query 142423 CTCGGACCTGTCTACGGCAA 142442 | |||||||| || || || Sbjct 5087 TTAGGACCTGTTTATGGTAA 5068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499420617967760