Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5352 93.3 4e-14 >seq5352 Length=5729 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 51730 TAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGT 51789 |||| || | ||| || || ||||| | ||| || || | ||||||| ||||| || | Sbjct 3148 TAGCTTCAATATTACCTAAATCGCCCAAGTGACGATTCTCGTCGTTCGGTGCGCCATGTT 3207 Query 51790 CGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGA 51849 | |||| ||| ||||| ||| || ||||| |||||||||||| | | ||||| | Sbjct 3208 CTTTGCCCTCGGGATTGAAATGTGGACCGGCCGATGTGCAGCCGTTGGTATTATCGCCAA 3267 Query 51850 ATTCGTGCACGTGGAATCCGTGCAGGCCC 51878 |||||||||| ||||| || || | |||| Sbjct 3268 ATTCGTGCACATGGAAGCCATGTAAGCCC 3296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475584096906360