Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027381.1 Length=68365 Score E Sequences producing significant alignments: (Bits) Value seq146045 98.7 4e-16 >seq146045 Length=14020 Score = 98.7 bits (108), Expect = 4e-16 Identities = 174/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 8768 TGCAGGTATGATTTTACCTCGTTCTGGGTTAGGGCATAAA-CATGGTATTGTGCTTGGAA 8826 ||||| |||||||| |||||||| || | || | |||| ||||| ||||||||||| | Sbjct 10873 TGCAGCGATGATTTTGCCTCGTTCAGGTCTTGG-CGTAAAGCATGGGATTGTGCTTGGTA 10815 Query 8827 ATCTTACAGGTCTCATTGATAGTGATTATCAAGGGGAACTGATGGTAAGCCTCTGGAATC 8886 || | || | |||||| ||||||||||| || ||||||| | |||||| Sbjct 10814 ATTTAGTTGGATTAATTGATGCGGATTATCAAGGTGAGTTGATGGTTTCTGTATGGAATA 10755 Query 8887 GCTCTACAAAGCCTTT--TACTATTAATCCAGGTGACCGTATTGCTCAGTTAGTTATTGT 8944 | ||||||||| || || ||| |||||| ||| | || ||| | |||| || Sbjct 10754 GAAGCCAAAAGCCTTTTGTAATAGAAAT--AGGTGAGCGTTTAGCGCAGATGATTATCGT 10697 Query 8945 GCCTGTAATGCAGCCTGAATTTGTTATAGTAGACTCTTTTGAAGCTACTGAAAGAGGCGA 9004 ||||| || ||| | |||||| | || || || |||||| |||| ||||| || Sbjct 10696 TCCTGTGATACAGGCAGAATTTAATGAGGTCGAATCCTTTGAAATCTCTGAGAGAGGTGA 10637 Query 9005 AGGTGGTTT 9013 ||| || || Sbjct 10636 AGGCGGATT 10628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 218183800641686