Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq90214 86.0 2e-12 >seq90214 Length=2210 Score = 86.0 bits (94), Expect = 2e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 41190 GGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAAT 41249 ||| ||||||| | ||||| ||| | || ||||| | || || ||||| ||| Sbjct 990 GGCCACTTAGGACAAGATCCTGAAGTTAAGTATATGCCTAATGGAAATGCCGTTGCGAAT 931 Query 41250 CTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAA 41309 |||| ||| || ||| ||||||||||||| |||||| | || || | |||| | Sbjct 930 CTAAACATTGCAACATCTGAAAGCTGGAAAGATAAACAATCAGGACAGCAACAAGATAGA 871 Query 41310 ACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGC 41356 || |||||||| || || || || || || ||||| || |||||||| Sbjct 870 ACTGAATGGCATCGTGTAGTTATTTTTGGCAAGCTTGCGGAAATTGC 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132936885064536