Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_028763.1 Length=49847 Score E Sequences producing significant alignments: (Bits) Value seq18428 84.2 7e-12 >seq18428 Length=2515 Score = 84.2 bits (92), Expect = 7e-12 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 38615 TTTACTTTTTTCCCAAATCCATTCATATTTAAAAAGTTTAGGGTTACTCATTACTAAAGC 38674 |||| ||||||||| |||| ||||| ||| || ||| ||||||||| ||||| Sbjct 1792 TTTAGATTTTTCCCACTTCCAATCATACTTATAATTCTTAATATTACTCATTCTCAAAGC 1733 Query 38675 ACTTGTAAAAGGTTGTGAAGCAGTTAAAACTATTGCGCCTTTATCTTTAAT 38725 ||||| |||||| | |||| || |||||| || || ||||||||||| || Sbjct 1732 ACTTGAAAAAGGCTCTGAACCAAATAAAACAATAGCTCCTTTATCTTTTAT 1682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159062489386458