Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq36071 93.3 3e-14 >seq36071 Length=11490 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 38945 GATTTGGTGCACCTTGCTGGGCTTGAACCAGCGACCTCACCCTTATGAGGGGTTTGCTCT 39004 ||| ||||| ||||| ||| ||||||||| ||||| | | ||||||| | |||||| Sbjct 8073 GATATGGTGGGCCTTGTTGGACTTGAACCAACGACCACTCGATTATGAGTCGAGTGCTCT 8132 Query 39005 AACCAACTAAGCTAAAGGCGCTAAATA--TGGTTCCCATGACTGGACTCGAACCA 39057 |||||||| |||||||||| || || | |||| ||| | ||||||||||||| Sbjct 8133 AACCAACTGAGCTAAAGGCCCTTAAGAATTGGTAGGCATAATTGGACTCGAACCA 8187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 370736192235739