Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_028954.1 Length=36065 Score E Sequences producing significant alignments: (Bits) Value seq149964 87.8 4e-13 >seq149964 Length=3032 Score = 87.8 bits (96), Expect = 4e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 26828 CCGCAATGCTTGCGGCCGAGTTCGTAAAGCCGCTTTTCCAGCGGGCGGCGCAGGCGGAAA 26887 ||||| ||||||||||||| || || || || ||||||||||||||||||||||||| Sbjct 1432 CCGCAGTGCTTGCGGCCGATCTCATACAGGCGGCGTTCCAGCGGGCGGCGCAGGCGGAAA 1373 Query 26888 TAATCGGGGTGAAGCGTCAGGATCGCGTTGGCTTCAATCGCCTGAAATATCCAGTC 26943 || ||| | ||| | || ||||||||||||||||| | | | |||||| Sbjct 1372 TAGTCGTTCGAGATCGTTATGACATCGTTGGCTTCAATCGCCCGCATGAACCAGTC 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115050378548574