Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq31472 93.3 8e-14 >seq31472 Length=15730 Score = 93.3 bits (102), Expect = 8e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 294857 AATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTC 294916 |||||||||||| || ||| |||||| | ||||||||||||||||||||||||||| Sbjct 9516 AATATGGTGCCGACACTCGGAATCGAACT-GAGGACCTACTGATTACAAGTCAGTTGCTC 9458 Query 294917 TACCAGCTGAGCTATAACGGC 294937 ||||||||||||||| |||| Sbjct 9457 TACCAGCTGAGCTATGTCGGC 9437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987149071301353