Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_029094.1 Length=131903 Score E Sequences producing significant alignments: (Bits) Value seq18428 91.5 1e-13 >seq18428 Length=2515 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 64291 AGTAGACCCACTACCCATTGTAAAATCTAAGATAGTTTCACCTCCATTAGTGTAGGTTTT 64350 ||| || || ||||||||||||||||| | | |||||| | | || ||||| ||||| Sbjct 2216 AGTTGAACCGCTACCCATTGTAAAATCAAGCACAGTTTCGTTTTCGTTTGTGTATGTTTT 2157 Query 64351 TATTAGGTACTCCATTAGAGCAACTGGTTTTTGTGTTGGATGTAT 64395 |||| ||||||||| || | |||||||||||| ||||| || || Sbjct 2156 GATTAAGTACTCCATAAGTGGAACTGGTTTTTGGGTTGGGTGCAT 2112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421078194066904