Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq111999 95.1 4e-15 >seq111999 Length=4320 Score = 95.1 bits (104), Expect = 4e-15 Identities = 178/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 8173 AGTGGCGTGATCCTCGGGGCGCGCGAGTACATGAACTCGCTT-GAAGAGTCCTCCATGGA 8231 || || || ||| | | || || || |||||||| | |||| ||||| || ||||| Sbjct 4032 AGCGGTGTTATCTTATGCGCCCGTGAATACATGAA-TAGCTTAGAAGATTCGAGTATGGA 3974 Query 8232 GGAAATCAAGCAGGCAATTCGATCCGAGCCATGGCTGGACGCGTACTTTGACATTGGTGA 8291 ||| ||||||| || || ||| | | ||||| | | || ||||| ||||| || Sbjct 3973 AGAAGTCAAGCAAGCTATAAAATCTGTAGCTTGGCTTAATGATTATTTTGAGATTGGCGA 3914 Query 8292 GAAGTACATTCGGACCAAGAATCGCCGAATTTCGTATGTGTTCTGCGGATTGCGCCATAA 8351 |||||| || || || || ||| || || ||| | || ||||||| | || || Sbjct 3913 GAAGTATATACGCACGAAAAATAAGCGTGTTAATTATATTTTTAGCGGATTAAGACACAA 3854 Query 8352 CCTCGACAGCATCAAGTCGAAGGCCAGAATCCTGATCGCCTGGGTTGACGAGGCTGAAAA 8411 || || ||||| || || || || ||||| | || || |||||||||||||| || || Sbjct 3853 TCTTGATAGCATAAAATCAAAAGCAAGAATTTTAATTGCTTGGGTTGACGAGGCGGAGAA 3794 Query 8412 CGTCAGCGAAACGGCGTGG 8430 || ||||| || ||| Sbjct 3793 TGTATCAGAAACAGCATGG 3775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156463022094190