Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq24727 109 8e-19 >seq24727 Length=7596 Score = 109 bits (120), Expect = 8e-19 Identities = 167/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 99517 TTAAAGGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTA 99576 |||||| || | ||||| ||||| || | || | || |||||||| |||||||||| Sbjct 5305 TTAAAGATGATAGAACTGGAACTGGGACTTACTCGGTTTTCGGGCATCAGATGCGTTTTA 5246 Query 99577 ATTTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTC 99636 |||| || |||||||||||||| || || ||||| | || || || |||||| Sbjct 5245 ATTTAGCCGAAGGTTTTCCTCTTGTAACGACTAAAAAATTACATCTTAAATCGATTATTT 5186 Query 99637 ATGAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCG 99696 ||||||| | ||||| | || || ||||| |||| | | || | | ||||| || | Sbjct 5185 ATGAACTTTTATGGTTTTTAAATGGCGATACAAATATCAAATATTTAACCGATAATGGTG 5126 Query 99697 TCACTATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAA 99754 | | || ||||| || |||| | | || || || |||||||| || || || || Sbjct 5125 TGAGAATTTGGAACGAATGGGCAGATAGTAATGGCGATTTAGGACCTGTTTATGGTAA 5068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 732692827765560