Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6671 152 1e-31 seq76123 96.9 7e-15 seq154088 95.1 3e-14 seq145979 95.1 3e-14 seq129586 95.1 3e-14 seq119855 95.1 3e-14 seq117040 95.1 3e-14 seq108307 95.1 3e-14 seq106367 95.1 3e-14 seq40997 95.1 3e-14 seq153791 91.5 3e-13 >seq6671 Length=4556 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || | |||| || | ||| ||| || ||||| |||||||| | Sbjct 4206 CCACCGCGTAGACGCAACACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAC 4147 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| ||||| || | ||| || || || ||||||||||| |||||||| ||| Sbjct 4146 AATGTGCGACCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCTGGTGGA 4087 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||||||||| ||||| || || || | || || ||||| || | |||||| Sbjct 4086 ATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCTGATGGTTCGACC 4027 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || || || ||||||||||| ||||| |||||||| Sbjct 4026 TCCAAGGTGATGGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 3980 Score = 147 bits (162), Expect = 5e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || | |||| || | ||| ||| || ||||| |||||||| | Sbjct 3750 CCACCGCGTAGACGCAACACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAC 3691 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| ||||| || | ||| || || || ||||||||||| |||||||| ||| Sbjct 3690 AATGTGCGACCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCTGGTGGA 3631 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || ||||||||||| || ||||| || | || |||||||| || | |||||| Sbjct 3630 ATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTGTCAGATGGCTCGACT 3571 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATA 283106 || | ||||| |||||||| || | || || || || || |||||||| ||| Sbjct 3570 TCCAAGGTGATTGTCTTACCAGTGAGTGTTTTCACAAAGATTTGCATTTTGATA 3517 Score = 145 bits (160), Expect = 2e-29 Identities = 149/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||| ||||| |||||||| | |||| || || ||||| || | || || || ||||| Sbjct 3942 TCTTTCTGGATATTGTAGTCGGACAAG-GTACGCCCATCTTCCAACTGCTTGCCAGCAAA 3884 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||||||| || ||||| |||||||| ||||||||||| ||||| || || ||| | Sbjct 3883 GATCAAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGCCTTCACGTT 3824 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||||| || | ||||| || || || ||||||||||| || Sbjct 3823 CTCAATGGTGTCTGATGGCTCGACCTCCAAGGTGATGGTTTTGCCGGTCAAAGTCTTGAC 3764 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 3763 GAAGATCTGCAT 3752 Score = 141 bits (156), Expect = 2e-28 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||| ||||| |||||||| | |||| || || ||||| || | || || || ||||| Sbjct 4398 TCTTTCTGGATATTGTAGTCGGACAAG-GTACGCCCATCTTCCAACTGCTTGCCAGCAAA 4340 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||||||| || ||||| |||||||| ||||||||||| ||||| || || || | Sbjct 4339 GATCAAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGACATT 4280 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||||| || | ||||| || || || ||||||||||| || Sbjct 4279 CTCAATGGTGTCTGATGGCTCGACCTCCAAGGTGATGGTTTTGCCGGTCAAAGTCTTGAC 4220 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 4219 GAAGATCTGCAT 4208 Score = 100 bits (110), Expect = 6e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| |||||||||||||| || || || ||| | |||||||| || || | ||| Sbjct 4545 GGAATACCTTCCTTGTCTTGGATTTTGGCCTTCACGTTCTCGATAGTATCGGATGGCTCG 4486 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||| || || || ||||||||||| ||||| |||||||| Sbjct 4485 ACCTCCAAGGTGATGGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 4436 >seq76123 Length=2128 Score = 96.9 bits (106), Expect = 7e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| ||| || |||||||| | || |||||||||||||| ||||| | Sbjct 987 ACCACCACGCAAGCGGAGCACCAGATGAAGTGTCGACTCTTTTTGGATGTTATAGTCGGA 1046 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || | ||| || || ||||| || |||||||| || || || Sbjct 1047 TAATGTGCGTCCATCTTCCAATTGCTTACCAGCAAAAATTAAACGTTGCTGATCTGGTGG 1106 Query 282992 AATACCCTCCTTGTCTTG 283009 |||||| || || ||||| Sbjct 1107 AATACCTTCTTTATCTTG 1124 >seq154088 Length=1757 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 847 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 791 >seq145979 Length=1469 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 600 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 544 >seq129586 Length=2124 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 938 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 994 >seq119855 Length=2000 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1463 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1519 >seq117040 Length=3332 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2297 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 2241 >seq108307 Length=1408 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1120 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1176 >seq106367 Length=1215 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 352 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 296 >seq40997 Length=1906 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1668 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1612 >seq153791 Length=3075 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||| | || || || | |||| ||| || || |||||||||||| || ||||| | Sbjct 2604 ACCAACCCGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTATAGTCGGA 2663 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || | |||||| || ||||| | |||||| ||||| || || Sbjct 2664 GAATGTGCGACCATCTTCCAATTGTTTGCCAGCAAATACCAAACGCTGTTGATCTGGAGG 2723 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||| || | || |||| |||||||| | |||||| | || || | || || Sbjct 2724 AATTTCCTCTTTTTGCTGAATCTAGGCTTTTACATTTTCGATACTATCAGAGGGCTCAAC 2783 Query 283052 TTCGAGAGTG 283061 | |||||| Sbjct 2784 CGCAAGAGTG 2793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044427070538254