Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq368 168 5e-37 >seq368 Length=53407 Score = 168 bits (186), Expect = 5e-37 Identities = 314/456 (69%), Gaps = 9/456 (2%) Strand=Plus/Plus Query 20325 TATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGC 20384 ||||||||| ||| || ||||| | || ||||||||||| | | ||||||||| | Sbjct 46671 TATTAATTTTTTTAGAAA-AACCCCACTGATCGAAGAATTATTATGTCTGCCTGGAACCC 46729 Query 20385 TAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCA---TATGCTATGCCAATTTTACGT 20441 ||| | || |||||| | ||||| || || | || || || ||||| || Sbjct 46730 ACCGGATCTTCCGAAAATGGCACTTCCTCCTTGCCACTGTCTGGTA---CAGTTTTATGT 46786 Query 20442 TGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGT 20501 || ||| ||||| || |||||| |||||||| |||| ||||||||||| | || || Sbjct 46787 GGCAAATGGGGAATTATCTTGTCAATTGTATCAAAGATCTGCTGATATGGGCTTAGGAGT 46846 Query 20502 TCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTT 20561 |||||| || || || |||||||| || || || |||||||| || || || || || | Sbjct 46847 TCCTTTTAACATAGCCAGTTATGCTCTCCTCACTTATATGATCGCCCACGTCACCAATCT 46906 Query 20562 AAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA 20621 ||| | || ||||| |||||||| | ||||| || || | || ||| || || || Sbjct 46907 CAAACCAGGAGACTTTGTCCACACTCTGGGAGATGCCCACGTCTATTCTAACCACATTGA 46966 Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCA-TTACTC 20680 |||| ||||| || | | | || || ||| |||| || ||| ||| | ||| Sbjct 46967 ACCTCTAAAAGAGCAACTCAAAAGAACCCCCAAAGAATTTCCCACT-TTCAAATTTAAGA 47025 Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740 || || | | ||| | |||||| || |||||| ||| | | ||| ||| | | Sbjct 47026 GACAGGTCGAGAAGATTGAAGATTTTCAATATGATGACTTTATCATCGAAAATTACAGCC 47085 Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776 | ||| |||| |||||||||| ||||||||| Sbjct 47086 CTCATCCCAAAATTGAAATGGAAATGGCTGTTTAAT 47121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398975357251270