Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq368 154 1e-32 >seq368 Length=53407 Score = 154 bits (170), Expect = 1e-32 Identities = 204/282 (72%), Gaps = 1/282 (0%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 || || |||| |||||| || |||||||| || |||| ||||| ||||||||||| Sbjct 46972 AGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCT 46913 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || | || |||||||| ||||||| ||| || ||||| || || ||||| |||||| Sbjct 46912 GGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTA 46853 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104 || || || || | |||||| || || || || || |||| || || || | ||||| Sbjct 46852 AAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAATTGACAAGATAATTCCCCA 46793 Query 21105 CGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 ||||| |||||||| || | ||| |||||||| || ||||| || || ||| Sbjct 46792 TTTGCCACATAAAACTGTACCAGACAGTGGCAAGGAGGAAGTGCCATTTTCGGAAGATCC 46733 Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGG 21205 | |||||||| || |||||| || | ||||| |||||| Sbjct 46732 GGTGGGTTCCAGGCAGACATAATAATTCTTCGATCAGTGGGG 46691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427552412981280