Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq22640 87.8 1e-12 >seq22640 Length=7414 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || |||| | |||||| |||| ||| |||||| || | ||||| |||||| Sbjct 1234 CCACCGCGGAGTCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1293 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || |||| || || ||||| |||||||||||||| || || | || Sbjct 1294 AGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGA 1353 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || |||| | ||||| | | | ||||| | ||| || Sbjct 1354 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCAGAGGGCTCCACC 1413 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || |||||||| || ||||| || ||||| || || |||||| Sbjct 1414 TCGAGGGTGATAGTTTTCCCCGTTAGGGTCTTCACGAAGATCTGCATT 1461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381170268359388