Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq368 104 2e-17 >seq368 Length=53407 Score = 104 bits (114), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 25446 TAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505 |||||||| || |||||||||||||||||||| ||||| |||| || ||| |||| Sbjct 46951 TAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCTGGTTTGAGATTGGTGACGTGG 46892 Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || ||||| || ||||||||| || ||||| |||||||| || || || || ||||| Sbjct 46891 GCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTAAAAGGAACTCCTAAGCCCATA 46832 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | | || || || || | ||||| || | || | | ||| |||||||| Sbjct 46831 T-CAGCAGATCTTTGATACAATTGACAAGATAATTCCCCATTTGCCACATAAAACTGTAC 46773 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652 || || ||| |||||||| || || Sbjct 46772 CAGACAGTGGCAAGGAGGAAGTGCCAT 46746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339959819217678