Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq368 96.9 4e-15 >seq368 Length=53407 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 ||| ||||||| || || || || | |||| | || |||||||| || || || | Sbjct 46982 TTGCTCTTTTAGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGAGTGTGGAC 46923 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 ||| || |||||||| | || | || || || | ||| || | | |||||| Sbjct 46922 AAAGTCTCCTGGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGAGCATAACT 46863 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGA 6989 |||| |||||||| || ||||| |||||||| || ||||||||||| |||||||||| Sbjct 46862 GGCTATGTTAAAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAATTGACAAGA 46803 Query 6990 TAA 6992 ||| Sbjct 46802 TAA 46800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595552567917600