Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1951 107 1e-18 >seq1951 Length=84517 Score = 107 bits (118), Expect = 1e-18 Identities = 185/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || |||||||||||||||||||| || || ||||| | || ||| | ||||| || Sbjct 24776 GGAGTTCATTTTATGATGGCTGACGGAGGCTTTTCGGTAAAAGGACAACAGAATATCCAG 24717 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 || || || || || || ||||| | || |||||| || | || |||| | | ||| Sbjct 24716 GAGATTTTGTCCAAGCAGCTGTATCTATGCCAATGTCTAGTAGCTTTGAATGTGGTTCGA 24657 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 ||| |||| ||| ||||| | |||||| || | || || |||||| |||| || Sbjct 24656 GAAAATGGACATTTTGTAGTCAAACTATTCGATCTAATGACCCCATTTAGTATTGGTCTA 24597 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114 | || || |||| | | ||| | || || | ||||||| || | ||| Sbjct 24596 ATTTACTTAATGTGGAAGTGTTTCCAAAAAATCTGCGTCCTCAAACCGAATACGAGTCGA 24537 Query 4115 CCGGCCAATTCTGAAAGATATTTGGTGTG 4143 || |||||||| ||||| ||| | ||||| Sbjct 24536 CCAGCCAATTCCGAAAGGTATCTCGTGTG 24508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276409052865658