Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8472 89.7 8e-14 >seq8472 Length=34887 Score = 89.7 bits (98), Expect = 8e-14 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| ||| ||||||| | | | ||||||| | | | | |||||| || || | Sbjct 32678 CTTCGTGATTACATCCAGGTACTTACCAAGC----TGTTCCTTGTCTGGTTCACCGAAGG 32733 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||| | | |||||| | |||| || |||| |||| || | || | || Sbjct 32734 GGTGTCAAACTAATTTCTGGACTCATCTACGAGGAGACCCGTGGAGTGCTTAAAGTGTTT 32793 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | | | || ||||||||||| || || | ||| |||| ||||| ||||||||| Sbjct 32794 TTGGATAATGTGATCCATGATGCAGTCACATACAACGAATACGCCAAACGAAAGACTGTC 32853 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATG 16685 || | |||||| |||||||||| ||||||| |||| || | | | |||| Sbjct 32854 ACAGCAATGGATGTCGTCTATGCTCTGAAACGCTAAGGACGCACGCTGTATG 32905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79035989029998