Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq4345 104 3e-17 >seq4345 Length=10194 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 126181 GTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTGA 126240 ||| | ||||| || || | || || ||||||||||| | ||| || || |||||| | Sbjct 5651 GTGAAGATGTAACGAGGCGAGGCAGAGTCCTTGCCTCCGTTCAAACGGGTTCCAAACGAA 5592 Query 126241 CCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGACA 126300 ||| |||| || || | | |||||| ||||| || | |||||| || |||| Sbjct 5591 CCGCTCGGCAGCAGCAGATTGATGTTGTTGCTGCCCACGAAATTCTGCGCCAAATTGATG 5532 Query 126301 ATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCG 126360 || |||| ||||||| |||||| ||||| | ||| |||| | | ||||| | ||| Sbjct 5531 ATCGTCTGGCACAGGGACTGCTCCCCGTGGTGGTACTCGGACGTGTGCGCCACCAAACCG 5472 Query 126361 CTCAGCTGCGCAACCTTGAT 126380 |||| |||||| ||||| || Sbjct 5471 CTCAACTGCGCCACCTTCAT 5452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611064248033600