Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq19288 140 6e-28 >seq19288 Length=6598 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||||||| || |||||||| || |||||||| || ||||| Sbjct 4249 CCTCCCCTCAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 4308 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | || || || || ||| Sbjct 4309 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGA 4368 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | | || || Sbjct 4369 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACC 4428 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | ||||||||||| |||||||| Sbjct 4429 TCAAGGGTGATGGTCTTGCCGGTCAATGTCTTGACGAAGATCTGCAT 4475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921128341271920