Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq368 156 4e-33 >seq368 Length=53407 Score = 156 bits (172), Expect = 4e-33 Identities = 196/265 (74%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 |||| |||||||||||||| ||||| | ||| || || ||| | ||| || || || Sbjct 46951 TAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCTGGTTTGAGATTGGTGACGTGG 46892 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | ||||||||| | ||| | ||| ||||| ||||||||||||||||| || ||||| Sbjct 46891 GCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTAAAAGGAACTCCTAAGCCCATA 46832 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTG-ACA 20370 || | || || ||||||| ||||| || | || || | || |||||||| || || Sbjct 46831 TCAGCAGATCTTTGATACAATTGACAAGATAATTCCCCATTTGCCACATAAAACTGTACC 46772 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 || |||| || || ||||| ||||| || | |||| |||||||| ||| |||| Sbjct 46771 AGAC-AGTGGCAAGGAGGAAGTGCCATTTTCGGAAGATCCGGTGGGTTCCAGGCAGACAT 46713 Query 20431 AATGATTCTTCTATC-GTGCGGATT 20454 ||| ||||||| ||| ||| || || Sbjct 46712 AATAATTCTTCGATCAGTGGGGTTT 46688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441136191076240