Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4345 105 8e-18 >seq4345 Length=10194 Score = 105 bits (116), Expect = 8e-18 Identities = 300/454 (66%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| || ||||| || || | ||| ||||| | |||||||||| |||| || || Sbjct 5806 AACCCGTTCCAATGCCCTCCGCGCCATTCACCAACACCATTGGAATAATTGGAATGTACC 5747 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 | | || |||||| | ||| || | |||||| | | | ||| |||||| | Sbjct 5746 ACTGCGGCTCAATCTTGTGGTTATCCTCGTACAAATACGTCAAAATGGGATCGTCCAGGG 5687 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 171905 ||| ||||| | | || || || || | ||||||||||| | | | || | Sbjct 5686 GATGGAAGATCATCCTGGCCAACTGCGTCAGCTGCGTGAAGATGTAACGAG---GCGAGG 5630 Query 171906 CA---TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGA 171962 || || ||||| || | | ||| || ||||| ||| | ||| || ||||||| Sbjct 5629 CAGAGTCCTTGCCTCCGTTCAAACGGGTTCCAAACGAACCGCTCGGCAGCAGCAGATTGA 5570 Query 171963 TATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTT 172022 | ||||| |||| | | | | ||||| |||| ||||| | ||||| | Sbjct 5569 TGTTGTTGCTGCCCACGAAATTCTGCGCCAAATTGATGATCGTCTGGCACAGGGACTGCT 5510 Query 172023 CACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGC-CAACTGTGCCACCTTCATC 172081 | ||||| ||||| | ||| ||| ||| || | |||| |||||| |||||||||||| Sbjct 5509 CCCCGTGGTGGTACTCGGACGTGTGCGCCACCAAA-CCGCTCAACTGCGCCACCTTCATC 5451 Query 172082 TCATCCTT---GAGGTTC-TTGTGG--AAGCACGCATACATGACCTTTCTCTGTGAAGGC 172135 || | ||| || ||| |||| | ||||||| ||||||| ||||||||| ||| Sbjct 5450 TCGTTCTTCTCCAGCTTCTTTGTCGCAAAGCACGTGTACATGATCTTTCTCTGGCCCGGC 5391 Query 172136 TTGAGGCCGTCGGCCATGTGCGCGATGGAACGCT 172169 || | ||||| | ||| || ||||| |||| Sbjct 5390 TTAAATCCGTCCACAATGCACGGAATGGATCGCT 5357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597033373668880