Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4345 114 2e-20 >seq4345 Length=10194 Score = 114 bits (126), Expect = 2e-20 Identities = 302/454 (67%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| || ||||| || || | ||| ||||| | |||||||||| |||| || || Sbjct 5806 AACCCGTTCCAATGCCCTCCGCGCCATTCACCAACACCATTGGAATAATTGGAATGTACC 5747 Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865 | | || |||||| | ||| |||| |||||| | | | ||| || ||| | Sbjct 5746 ACTGCGGCTCAATCTTGTGGTTATCCTCGTACAAATACGTCAAAATGGGATCGTCCAGGG 5687 Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 175925 ||| ||||| | | || || || || | ||||||||||| | | | || | Sbjct 5686 GATGGAAGATCATCCTGGCCAACTGCGTCAGCTGCGTGAAGATGTAACGAG---GCGAGG 5630 Query 175926 CA---TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 || || ||||| || | | ||| || ||||| ||| | ||| || ||||||| Sbjct 5629 CAGAGTCCTTGCCTCCGTTCAAACGGGTTCCAAACGAACCGCTCGGCAGCAGCAGATTGA 5570 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTT 176042 | ||||| ||||| | | | |||||| |||| ||||| | ||||| | Sbjct 5569 TGTTGTTGCTGCCCACGAAATTCTGCGCCAAATTGATGATCGTCTGGCACAGGGACTGCT 5510 Query 176043 CACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGC-CAACTGCGCCACCTTCATC 176101 | ||||| ||||| | ||| ||| |||||| | |||| ||||||||||||||||||| Sbjct 5509 CCCCGTGGTGGTACTCGGACGTGTGCGCCACCAAA-CCGCTCAACTGCGCCACCTTCATC 5451 Query 176102 TCATCCTT---GAGGTTC-TTGTGG--AAGCACGCATACATGACCTTTCTCTGTGAAGGC 176155 || | ||| || ||| |||| | ||||||| ||||||| ||||||||| ||| Sbjct 5450 TCGTTCTTCTCCAGCTTCTTTGTCGCAAAGCACGTGTACATGATCTTTCTCTGGCCCGGC 5391 Query 176156 TTGAGGCCGTCGGCCATGTGTGCGATGGAACGCT 176189 || | ||||| | ||| | ||||| |||| Sbjct 5390 TTAAATCCGTCCACAATGCACGGAATGGATCGCT 5357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613178314127760