Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq22640 132 5e-26 seq19288 125 8e-24 >seq22640 Length=7414 Score = 132 bits (146), Expect = 5e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || || |||||||| |||||||| Sbjct 1269 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAA 1328 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 1329 AATCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1388 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| | ||||| || | ||||| ||||| ||||| || || || || Sbjct 1389 CTCGATCGTGTCAGAGGGCTCCACCTCGAGGGTGATAGTTTTCCCCGTTAGGGTCTTCAC 1448 Query 46582 AAAGATTTGCATT 46594 ||||| |||||| Sbjct 1449 GAAGATCTGCATT 1461 >seq19288 Length=6598 Score = 125 bits (138), Expect = 8e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||||| || | || |||||| ||||| ||||||||||| Sbjct 4249 CCTCCCCTCAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 4308 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || ||||||||||| ||||| ||||| |||||||| || | || Sbjct 4309 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGA 4368 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||||| |||||| ||| | || | | |||||| | || || Sbjct 4369 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACC 4428 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598 || | |||||||| ||||| |||| || || || ||||| ||||| |||| Sbjct 4429 TCAAGGGTGATGGTCTTGCCGGTCAATGTCTTGACGAAGATCTGCATCTTGC 4480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564935389824720