Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq25027 107 2e-18 >seq25027 Length=9736 Score = 107 bits (118), Expect = 2e-18 Identities = 307/459 (67%), Gaps = 26/459 (6%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||||| ||| |||| ||||||||||||||||| || ||||| ||||| ||||| Sbjct 6286 TATTCACCGACCTTCTTCTCGAAGAAATTCGTCTTCCCCTCGAGCGAGATAAACTCCATG 6227 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGATTGGTGGTTGAC---CAACTTGTTTCAGAAGA 119324 || | ||||||||| | ||| ||||| | | ||| || || | |||||| Sbjct 6226 AAATTGAAAGGATTTGGCGTGTTGTAGATT--TTCTCGACTCCCAGCTCCACT-AGAAGA 6170 Query 119325 CGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGAT-T 119383 || || | |||| | || || || ||||||| || | ||||| || || | | | Sbjct 6169 CGGTCCGCGACAAATTCAATGTAAAAGGACATCAGTTTGCAGTTCATGCCGATCATGTCT 6110 Query 119384 ACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACG-ATGG 119442 || || ||||| || | ||| | || || || |||| ||||| ||| ||| Sbjct 6109 ACT-GGAAGAGCGTCTGTCAAGAATTCCTGTTCAATGACCACGGCTTC----ACGGATGA 6055 Query 119443 AGTGAATAGTTTCTGTCGATGGTTTGTTTCT----CAAGAGTTTAAACA--ACTCTACGG 119496 | |||| || | || | || | |||| |||| |||| |||| | | | | Sbjct 6054 TTTCAATAATTCGT-TCCTTTGTCGGCTTCTGCACCAAGTGTTTGAACATGAGGCAA--G 5998 Query 119497 CAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCC 119554 | || || || || ||||| || || || || || ||||| |||| |||| || Sbjct 5997 CGAAATCACAGTGCAGTCCTTCGTCTCGTGAAATCAGTTCATTGGAGAAGGTCAAA--CC 5940 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||| || |||| |||||||||||||||||| | ||| |||||| || ||||| Sbjct 5939 AGGCATTAGACCTCGTTTCTTTAGCCAAAAGATAGAGGCAAAGCTTCCACTGAAAAAGAT 5880 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 ||| |||||| || ||||| | | ||| || |||| Sbjct 5879 GCCTTCCACAGCTGCAAAAGCAATCACACGTTCTCCAAA 5841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588660264690800