Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq19288 120 7e-22 >seq19288 Length=6598 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || || || ||||| |||| || |||| || || || ||||| Sbjct 4272 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCCAGCTG 4331 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || ||||| ||||| || || ||||| || || || Sbjct 4332 CTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTT 4391 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || ||||| || ||||| || || || |||||||| | ||||| || || Sbjct 4392 GGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGT 4451 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 4452 CAATGTCTTGACGAAGATCTGCAT 4475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108871965517562