Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq368 129 5e-25 >seq368 Length=53407 Score = 129 bits (142), Expect = 5e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 29824 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29883 |||||||| || |||||||| ||||||||||| ||||| |||| || ||||||||| Sbjct 46951 TAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTCTCCTGGTTTGAGATTGGTGACGTGG 46892 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 || ||||| || |||||||||| || ||||| |||||||| || || || | ||||| Sbjct 46891 GCGATCATATAAGTGAGGAGAGCATAACTGGCTATGTTAAAAGGAACTCCTAAGCCCATA 46832 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30003 || | || || || || | ||||| || | || || | ||| |||||||| | Sbjct 46831 TCAGCAGATCTTTGATACAATTGACAAGATAATTCCCCATTTGCCACATAAAACTGTACC 46772 Query 30004 ATGGTGTGGCACGGAGGAAGAGCCAT 30029 | |||||| |||||||| ||||| Sbjct 46771 AGACAGTGGCAAGGAGGAAGTGCCAT 46746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408404026562078