Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq4345 89.7 5e-13 >seq4345 Length=10194 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGCAA 146437 ||||||||||| || || || | ||||| | | |||| ||| | ||||||||||| Sbjct 5455 AAGGTGGCGCAGTTGAGCGGTTTGGTGGCGCACACGTCCGAGTACCACCACGGGGAGCAG 5514 Query 146438 AACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCC 146497 | ||||| |||| ||||| || || |||||| |||| ||||||||||| || ||| Sbjct 5515 TCCCTGTGCCAGACGATCATCAATTTGGCGCAGAATTTCGTGGGCAGCAACAACATCAAT 5574 Query 146498 CTTCT-CTACCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGC 146552 || || || || || || ||||| | ||| | ||||| |||||| |||| Sbjct 5575 CTGCTGCTGCCGAGCGGTTCGTTTGGAACCCGTTTGAACGGAGGCAAGGACTCTGC 5630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521266012442480