Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq25828 84.2 2e-11 seq11803 84.2 2e-11 >seq25828 Length=6072 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 || || || |||||| | || ||||| ||||||||||| || | || || | ||| | | Sbjct 4600 TAGGTTTCTATAGCGGCATCAATGTCCTCGCCGTGAATACCAACAGCCACCCTCATCAAC 4541 Query 148297 ATGTGCTGTGGTCGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCAT-TTTCGA 148354 ||||||||||||| ||| || | |||| | |||||||| | | ||| | || ||| | Sbjct 4540 ATGTGCTGTGGTCTTTCCGCTACCTTGCCT-TTGATCTTCAATAAATA-CGATCGTTCCA 4483 Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATC 148388 ||||| | |||||||| ||||| ||||||| Sbjct 4482 ATGTTTTAAATCCAAAGTAATTGTATCCAAAATC 4449 >seq11803 Length=6467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 || || || |||||| | || ||||| ||||||||||| || | || || | ||| | | Sbjct 5356 TAGGTTTCTATAGCGGCATCAATGTCCTCGCCGTGAATACCAACAGCCACCCTCATCAAC 5297 Query 148297 ATGTGCTGTGGTCGTT-CGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT-TTTCGA 148354 ||||| ||||||| || || || |||| | |||||||| | | ||| | || ||| | Sbjct 5296 ATGTGTTGTGGTCTTTCCGCCACCTTGCCT-TTGATCTTCAATAAATA-CGATCGTTCCA 5239 Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGT 148396 ||||| | |||||||| ||||| |||||||| | |||| Sbjct 5238 ATGTTTTAAATCCAAAGTAATTGTATTCAAAATCACGATCGT 5197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476355700650960