Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq368 138 1e-27 >seq368 Length=53407 Score = 138 bits (152), Expect = 1e-27 Identities = 187/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 146916 TTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTC 146975 ||| || || || | |||||| |||||||| || || ||||| ||||| |||||||| Sbjct 46976 TTTTAGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTC 46917 Query 146976 CCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTAT 147035 || || || || ||| |||||||| | ||| || ||||| || | || |||||||| Sbjct 46916 TCCTGGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGAGCATAACTGGCTAT 46857 Query 147036 GTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095 ||| || || || || | |||||| || | || || || |||| || || || | || Sbjct 46856 GTTAAAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAATTGACAAGATAATTC 46797 Query 147096 CCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAG 147155 ||| | ||||| |||||||| ||| |||||| || || || ||||| || || Sbjct 46796 CCCATTTGCCACATAAAACTGTACCAGACAGTGGCAAGGAGGAAGTGCCATTTTCGGAAG 46737 Query 147156 GTCCGCGGGGTTCCAGGCCGA 147176 |||| ||||||||||| || Sbjct 46736 ATCCGGTGGGTTCCAGGCAGA 46716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583175206670400