Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq22640 129 5e-25 seq19288 122 8e-23 >seq22640 Length=7414 Score = 129 bits (142), Expect = 5e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| |||| || ||| || | || || Sbjct 1251 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTC 1310 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || ||||| ||||||||||||| |||| | |||||||||| Sbjct 1311 CAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 1370 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| | |||||||| | ||||| ||||| Sbjct 1371 GATCTTGGCCTTGACATTCTCGATCGTGTCAGAGGGCTCCACCTCGAGGGTGATAGTTTT 1430 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | || ||||| || ||||||||| Sbjct 1431 CCCCGTTAGGGTCTTCACGAAGATCTGCATT 1461 >seq19288 Length=6598 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| |||| || |||||| |||| || Sbjct 4266 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTC 4325 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || ||||| |||||||| || | |||| | |||||||||| Sbjct 4326 CAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTG 4385 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||||| | | | | |||||| | || ||||| | ||||| || || Sbjct 4386 GATCTTGGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTT 4445 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || || || || |||||||| Sbjct 4446 GCCGGTCAATGTCTTGACGAAGATCTGCAT 4475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450551940820880