Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq368 100 2e-16 >seq368 Length=53407 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 111705 TTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTC 111764 || || ||| | ||||| || |||| || || |||||||| | | |||| || || Sbjct 46976 TTTTAGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGAGTGTGGACAAAGTC 46917 Query 111765 CCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAAT 111824 | || | | | |||| ||| || ||||| || ||||| ||| ||||| || || Sbjct 46916 TCCTGGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGAGCATAACTGGCTAT 46857 Query 111825 GTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTT 111884 |||||| || || |||| ||||||||| | ||||||||||| | ||||| |||| || Sbjct 46856 GTTAAAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAATTGACAAGATAATTC 46797 Query 111885 ATTTTGTGACACATAAAATTGACAAAGTACA-TGACAAGGAGGCAATGCCAT 111935 | || ||||||||| || || ||| || |||||||| | |||||| Sbjct 46796 CCCATTTGCCACATAAAACTGTACCAG-ACAGTGGCAAGGAGGAAGTGCCAT 46746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391740740568418