Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq19288 127 2e-24 >seq19288 Length=6598 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| || || || ||| Sbjct 4475 ATGCAGATCTTCGTCAAGACATTGACCGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 4416 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || ||||| || || || || || ||||| Sbjct 4415 GACACTATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 4356 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| ||||| || |||| ||| | ||| | ||||| |||||| Sbjct 4355 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAGGACGGCCGAACCCTGTCCGACTACAAC 4296 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| | ||| || |||| || || Sbjct 4295 ATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTGAGGGGAGGTAT 4246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434685251118720