Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_028855.1 Length=44846 Score E Sequences producing significant alignments: (Bits) Value seq42886 89.7 1e-13 >seq42886 Length=37834 Score = 89.7 bits (98), Expect = 1e-13 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 15982 TCATTTAGTTC-GTATTGATTTTCGCAAACTATATAATCAACACCGAATATCTTTTTATT 16040 ||||||||||| ||| || | || |||| | ||||||| ||| |||| ||||||| Sbjct 33557 TCATTTAGTTCTGTAATGTTCTT-GCAAGGCAAATAATCACAACCAAATAAGTTTTTATG 33615 Query 16041 ATTCATAAAGTGGATTAATACATAATTTCCA-ACCTTCTCATGACTATCCCTTGTCAACC 16099 || |||||| || ||||| || |||||| | | ||| || | || |||| | || Sbjct 33616 ATCCATAAAATGTATTAACACGTAATTTTCGTATCTTGG-ATAAGAGTCTTTTGTTATCC 33674 Query 16100 ATATTCTTGACATTGCAAAATCAAATTTATGGTGAAATCCTTTCTTT 16146 ||||| | ||||||||||||||| ||||| || |||||||||| Sbjct 33675 ATATTAATTTCATTGCAAAATCAAACTTATGAAAAATTCCTTTCTTT 33721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143312577836256