Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq368 113 4e-20 >seq368 Length=53407 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 118450 CTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATT 118509 ||| ||||||| ||| || || |||||||| || |||||| || ||||| || | Sbjct 46990 CTTTTGAGTTGCTCTTTTAGAGGTTCAATGTGGTTAGAATAGACGTGGGCATCTCCCAGA 46931 Query 118510 GTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAA 118569 || || | || || || ||| | || || | ||| || ||||| || || | | | Sbjct 46930 GTGTGGACAAAGTCTCCTGGTTTGAGATTGGTGACGTGGGCGATCATATAAGTGAGGAGA 46871 Query 118570 CTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAAT 118629 || ||||||| ||||||||||| || | ||||| || || ||||| || |||||| Sbjct 46870 GCATAACTGGCTATGTTAAAAGGAACTCCTAAGCCCATATCAGCAGATCTTTGATACAAT 46811 Query 118630 TGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 || ||||| | ||||| ||||| ||||||||||| Sbjct 46810 TGACAAGATAATTCCCCATTTGCCACATAAAACTG 46776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414260164115704