Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clogmia_20albipunctata_20[genbank_20GCA_5F001014945.1_202015-05-29] 42,886 sequences; 256,248,749 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq22640 161 2e-34 seq19288 149 1e-30 >seq22640 Length=7414 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || |||| || || | ||| || |||||||| || |||||||| || || | ||||| Sbjct 1240 CGGAGTCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 1299 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| ||||||||||| || ||||| || | || || ||||| || |||| ||| Sbjct 1300 CGGCCATCCTCCAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGAATTCCC 1359 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || || || ||||| ||||||||| || |||||||| Sbjct 1360 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCAGAGGGCTCCACCTCGAGG 1419 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || ||||| || ||||| || || | ||||||| Sbjct 1420 GTGATAGTTTTCCCCGTTAGGGTCTTCACGAAGATCTGCATT 1461 >seq19288 Length=6598 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||||||||| || |||||||| || || | ||||| | || || Sbjct 4264 AGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCC 4323 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || | || || || || || |||| ||| ||||||||| Sbjct 4324 TCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCC 4383 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| ||| || ||||| || ||||| ||| Sbjct 4384 TGGATCTTGGCCTTCACATTCTCGATAGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTC 4443 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || | ||||| || || | |||||| || Sbjct 4444 TTGCCGGTCAATGTCTTGACGAAGATCTGCATCTT 4478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158515072781390